Selected publications

Publications

2024

Towards tailoring hydrophobic interaction with uranyl(VI) oxygen for C-H activation

Tsushima, S.⁽¹⁾; Kretzschmar, J.⁽²⁾; Doi, H.; Okuwaki, K.⁽³⁾; Kaneko, M.⁽⁴⁾; et al. (7 authors)⁽⁵⁾Mochizuki, Y.⁽⁶⁾; Takao, K.⁽⁷⁾

Chemical Communications 60(2024), 4769-4772
DOI: 10.1039/D4CC01030B⁽⁸⁾

Cold denaturation of DNA origami nanostructures

Dornbusch, D.⁽⁹⁾; Hanke, M.; Tomm, E.; Grundmeier, G.; Keller, A.; et al. (7 authors)⁽¹⁰⁾Fahmy, K.⁽¹¹⁾; Kielar, C.⁽¹²⁾

Chemical Communications (2024)
DOI: 10.1039/D3CC05985E⁽¹³⁾

2023

Large-Scale Formation of DNA Origami Lattices on Silicon

Tapio, K.⁽¹⁴⁾; Kielar, C.⁽¹⁵⁾; Parikka, J. M.⁽¹⁶⁾; Keller, A.⁽¹⁷⁾; Järvinen, H.⁽¹⁸⁾; et al. (7 authors)⁽¹⁹⁾Fahmy, K.⁽²⁰⁾; Jussi Toppari, J.⁽²¹⁾

Chemistry of Materials 35(2023)5, 1961-1971
DOI: 10.1021/acs.chemmater.2c03190⁽²²⁾

Molecular Adhesion of a Pilus-derived Peptide Involved in Pseudomonas aeruginosa Biofilm Formation on non-polar ZnO Surfaces

Prüßner, T.; Meinderink, D.⁽²³⁾; Zhu, S.; Orive, A. G.⁽²⁴⁾; Kielar, C.⁽²⁵⁾; et al. (9 authors)⁽²⁶⁾

Chemistry - A European Journal 30(2023)4, e202302464
DOI: 10.1002/chem.202302464⁽³¹⁾

Fate of Oxidation States at Actinide Centers in Redox-Active Ligand Systems Governed by Energy Levels of 5f Orbitals

Takeyama, T.⁽³²⁾; Tsushima, S.⁽³³⁾; Gericke, R.⁽³⁴⁾; Kaden, P.⁽³⁵⁾; März, J.⁽³⁶⁾; et al. (6 authors)⁽³⁷⁾Takao, K.⁽³⁸⁾

Chemistry - A European Journal 29(2023)69, e202302702
DOI: 10.1002/chem.202302702⁽³⁹⁾

Superstructure-dependent stability of DNA origami nanostructures in the presence of chaotropic denaturants

Hanke, M.; Dornbusch, D.⁽⁴⁰⁾; Tomm, E.; Grundmeier, G.; Fahmy, K.; et al. (6 authors)⁽⁴¹⁾Keller, A.

Nanoscale 15(2023)41, 16590-16600
DOI: 10.1039/d3nr02045b⁽⁴²⁾

Interaction between the transferrin protein and plutonium (and thorium), what’s new?

Zurita, C.; Tsushima, S.⁽⁴³⁾; Lorenzo Solari, P.; Menut, D.; Dourdain, S.; et al. (8 authors)⁽⁴⁴⁾Jeanson, A.; Creff, G.; Den Auwer, C.

Chemistry - A European Journal 29(2023)55, e202300636
DOI: 10.1002/chem.202300636⁽⁴⁵⁾

Special Issue “Advances in Monitoring Metabolic Activities of Microorganisms by Calorimetry”

Matulis, D.; Wadsö, L.; Fahmy, K.⁽⁴⁶⁾

Microorganisms 11(2023)5, 1204
DOI: 10.3390/microorganisms11051204⁽⁴⁷⁾

Distinct Effects of Chemical Toxicity and Radioactivity on Metabolic Heat of Cultured Cells Revealed by “Isotope-Editing”

Oertel, J.; Sachs, S.⁽⁴⁸⁾; Flemming, K.; Hassan Obeid, M.; Fahmy, K.⁽⁴⁹⁾

Microorganisms 11(2023)3, 584
DOI: 10.3390/microorganisms11030584⁽⁵⁰⁾

Utility of redox-active ligands for reversible multi-electron transfer in uranyl(VI) complexes

Takeyama, T.; Tsushima, S.⁽⁵¹⁾; Takao, K.

Inorganic Chemistry Frontiers 10(2023)14, 4028-4044
DOI: 10.1039/D3QI00189J⁽⁵²⁾

Interdisciplinary biophysical studies of membrane proteins bacteriorhodopsin and rhodopsin

Fahmy, K.⁽⁵³⁾; Sakmar, T.

Biophysical Reviews 15(2023), 111-125
Online First (2022) DOI: 10.1007/s12551-022-01003-y⁽⁵⁴⁾

2022

Simple Growth–Metabolism Relations Are Revealed by Conserved Patterns of Heat Flow from Cultured Microorganisms

Fahmy, K.⁽⁵⁵⁾

Microorganisms 10(2022), 1397
DOI: 10.3390/microorganisms10071397⁽⁵⁶⁾

Lanmodulin peptides – unravelling the binding of the EF-Hand loop sequences stripped from the structural corset

Gutenthaler, S. M.⁽⁵⁷⁾; Tsushima, S.⁽⁵⁸⁾; Steudtner, R.⁽⁵⁹⁾; Gailer, M.; Hoffmann-Röder, A.; et al. (7 authors)⁽⁶⁰⁾Drobot, B.⁽⁶¹⁾; Daumann, L. J.

Inorganic Chemistry Frontiers 9(2022)16, 4009-4021
DOI: 10.1039/d2qi00933a⁽⁶²⁾

Anion-specific structure and stability of guanidinium-bound DNA origami

Hanke, M.; Dornbusch, D.⁽⁶³⁾; Hadlich, C.; Roßberg, A.; Hansen, N.; et al. (9 authors)⁽⁶⁴⁾

Computational and Structural Biotechnology Journal 20(2022), 2611-2623
DOI: 10.1016/j.csbj.2022.05.037⁽⁶⁷⁾

Salting-Out of DNA Origami Nanostructures by Ammonium Sulfate

Hanke, M.; Hansen, N.; Ruiping, C.; Grundmeier, G.; Fahmy, K.⁽⁶⁸⁾; et al. (6 authors)⁽⁶⁹⁾Keller, A.

International Journal of Molecular Sciences 23(2022)5, 2817
DOI: 10.3390/ijms23052817⁽⁷⁰⁾

Fully Chelating N3O2-Pentadentate Planar Ligands Designed for Strongest and Selective Capture of Uranium from Seawater

Mizumachi, T.; Sato, M.; Kaneko, M.; Takeyama, T.; Tsushima, S.⁽⁷¹⁾; et al. (6 authors)⁽⁷²⁾Takao, K.

Inorganic Chemistry 61(2022)16, 6175-6181
DOI: 10.1021/acs.inorgchem.2c00306⁽⁷³⁾

Hydrophobic Core Formation and Secondary Structure Elements in Uranyl(VI)–Binding Peptides

Tsushima, S.⁽⁷⁴⁾; Takao, K.

Physical Chemistry Chemical Physics 24(2022), 4455-4461
DOI: 10.1039/D1CP05401E⁽⁷⁵⁾

Synthesis and characterization of a uranyl(vi) complex with 2,6-pyridine-bis(methylaminophenolato) and its ligand-centred aerobic oxidation mechanism to a diimino derivative

Takeyama, T.; Iwatsuki, S.; Tsushima, S.⁽⁷⁶⁾; Takao, K.

Dalton Transactions 51(2022), 6576-6585
DOI: 10.1039/D2DT00325B⁽⁷⁷⁾

Interaction of Th(IV), Pu(IV) and iron(III) with ferritin protein : how similar ?

Zurita, C.; Tsushima, S.⁽⁷⁸⁾; Lorenzo Solari, P.; Jeanson, A.; Creff, G.; et al. (6 authors)⁽⁷⁹⁾Den Auwer, C.

Journal of Synchrotron Radiation 29(2022)1, 45-52
DOI: 10.1107/S1600577521012340⁽⁸⁰⁾
ISSN: 1600-5775

2021

Effects of Substituents on the Molecular Structure and Redox Behavior of Uranyl(V/VI) Complexes with N3O2‑Donating Schiff Base Ligands

Takeyama, T.⁽⁸¹⁾; Tsushima, S.⁽⁸²⁾; Takao, K.⁽⁸³⁾

Inorganic Chemistry 60(2021)15, 11435-11449
DOI: 10.1021/acs.inorgchem.1c01449⁽⁸⁴⁾

DNA-Mediated Stack Formation of Nanodiscs

Subramanian, M.; Kielar, C.; Tsushima, S.⁽⁸⁵⁾; Fahmy, K.⁽⁸⁶⁾; Oertel, J.

Molecules 26(2021)6, 1647
DOI: 10.3390/molecules26061647⁽⁸⁷⁾

Effect of PAA-induced surface etching on the adhesion properties of ZnO nanostructured films

Meinderink, D.; Kielar, C.; Sobol, O.; Ruhm, L.; Rieker, F.; et al. (9 authors)⁽⁸⁸⁾

International Journal of Adhesion and Adhesives 106(2021), 102812
DOI: 10.1016/j.ijadhadh.2021.102812⁽⁸⁹⁾
ISSN: 0143-7496

Fluorite-like hydrolyzed hexanuclear coordination clusters of Zr(IV) and Hf(IV) with syn-syn bridging N,N,N-trimethylglycine in soft crystal structures exhibiting cold-crystallization

Matsuoka, M.; Tsushima, S.⁽⁹⁰⁾; Takao, K.

Inorganica Chimica Acta 528(2021), 120622
DOI: 10.1016/j.ica.2021.120622⁽⁹¹⁾

How does iron storage protein ferritin interact with plutonium (and thorium) ?

Zurita, C.; Tsushima, S.⁽⁹²⁾; Bresson, C.⁽⁹³⁾; Garcia-Cortes, M.⁽⁹⁴⁾; Solari, P. L.⁽⁹⁵⁾; et al. (8 authors)⁽⁹⁶⁾

Chemistry - A European Journal 27(2021)7, 2393-2401
Online First (2020) DOI: 10.1002/chem.202003653⁽⁹⁹⁾

2020

A metabolic switch regulates the transition between growth and diapause in C. elegans

Penkov, S.; Raghuraman, B. K.; Erkut, C.; Oertel, J.; Galli, R.; et al. (12 authors)⁽¹⁰⁰⁾

BMC Biology 18(2020), 31
DOI: 10.1186/s12915-020-0760-3⁽¹⁰¹⁾

C. elegans possess a general program to enter cryptobiosis that allows dauer larvae to survive different kinds of abiotic stress

Gade, V. R.; Traikov, S.; Oertel, J.; Fahmy, K.; Kurzchalia, T. V.

Scientific Reports 10(2020), 13466
DOI: 10.1038/s41598-020-70311-8⁽¹⁰²⁾

Protein-Assisted Room-Temperature Assembly of Rigid, Immobile Holliday Junctions and Hierarchical DNA Nanostructures

Ramakrishnan, S.; Subramaniam, S.; Kielar, C.; Grundmeier, G.; Stewart, A. F.; et al. (6 authors)⁽¹⁰³⁾Keller, A.

Molecules 21(2020), 5099
DOI: 10.3390/molecules25215099⁽¹⁰⁴⁾

Essential Role of Heterocyclic Structure of N-Alkylated 2-Pyrrolidone Derivatives for Recycling Uranium from Spent Nuclear Fuels

Inoue, T.; Kazama, H.; Tsushima, S.⁽¹⁰⁵⁾; Takao, K.⁽¹⁰⁶⁾

Bulletin of the Chemical Society of Japan 93(2020)7, 846-853
DOI: 10.1246/bcsj.20200061⁽¹⁰⁷⁾

Crystallization of colourless hexanitratoneptunate(IV) with anhydrous H+ countercations trapped into hydrogen bond polymer with diamide linkers

Takao, K.⁽¹⁰⁸⁾; März, J.⁽¹⁰⁹⁾; Matsuoka, M.; Mashita, T.; Kazama, H.; et al. (6 authors)⁽¹¹⁰⁾Tsushima, S.⁽¹¹¹⁾

RSC Advances 10(2020), 6082-6087
DOI: 10.1039/C9RA10090C⁽¹¹²⁾

2019

Crystallization of Anhydrous Proton from Acidic Aqueous Solution with Diamide Building Block

Kazama, H.; Tsushima, S.; Takao, K.

Crystal Growth & Design 19(2019)11, 6048-6052
DOI: 10.1021/acs.cgd.9b01214⁽¹¹³⁾

Lanthanide–induced conformational change of methanol dehydrogenase involving coordination change of cofactor pyrroloquinoline quinone

Tsushima, S.⁽¹¹⁴⁾

Physical Chemistry Chemical Physics 21(2019), 21979-21983
DOI: 10.1039/C9CP03953H⁽¹¹⁵⁾

Calcium binding to a disordered domain of a type III-secreted protein from a coral pathogen promotes secondary structure formation and catalytic activity

Hoyer, E.; Knöppel, J.; Liebmann, M.; Steppert, M.; Raiwa, M.; et al. (12 authors)⁽¹¹⁶⁾

Scientific Reports 9(2019), 7115
DOI: 10.1038/s41598-019-42898-0⁽¹¹⁷⁾

Photocatalytic Oxygenation of Cyclohexene Initiated by Excitation of [UO2(OPCyPh2)4]2+ under Visible Light

Mashita, T.; Tsushima, S.⁽¹¹⁸⁾; Takao, K.⁽¹¹⁹⁾

ACS Omega 4(2019)4, 7194-7199
DOI: 10.1021/acsomega.9b00635⁽¹²⁰⁾

Body size-dependent energy storage causes Kleiber’s law scaling of the metabolic rate in planarians

Thommen, A.; Werner, S.; Frank, O.; Philipp, J.; Knittelfelder, O.; et al. (11 authors)⁽¹²¹⁾

eLife 8(2019), e38187
DOI: 10.7554/eLife.38187⁽¹²²⁾

Crystal Structure of Regularly Th-Symmetric [U(NO₃)₆]²⁻ Salts with Hydrogen Bond Polymers of Diamide Building Blocks

Takao, K.; Kazama, H.; Ikeda, Y.; Tsushima, S.

Angewandte Chemie - International Edition 58(2019), 240-243
DOI: 10.1002/anie.201811731⁽¹²³⁾
Angewandte Chemie 131(2019), 246-249
DOI: 10.1002/ange.201811731⁽¹²⁴⁾

Cm3+/ Eu3+ Induced Structural, Mechanistic and Functional Implications for Calmodulin

Drobot, B.⁽¹²⁵⁾; Schmidt, M.⁽¹²⁶⁾; Mochizuki, Y.⁽¹²⁷⁾; Abe, T.; Okuwaki, K.; et al. (13 authors)⁽¹²⁸⁾

Physical Chemistry Chemical Physics 21(2019)38, 21213-21222
DOI: 10.1039/C9CP03750K⁽¹³⁵⁾

2018

Ultrafast transient absorption spectroscopy of UO22+ and [UO2Cl]+

Haubitz, T.; Tsushima, S.; Steudtner, R.; Drobot, B.; Geipel, G.; et al. (7 authors)⁽¹³⁶⁾Stumpf, T.; Kumke, M. U.

Journal of Physical Chemistry A 122(2018)35, 6970-6977
DOI: 10.1021/acs.jpca.8b05567⁽¹³⁷⁾

Controlling the lability of uranyl(VI) through intramolecular π-π Stacking

Mashita, T.; Tsushima, S.; Takao, K.

Dalton Transactions 47(2018)37, 13072-13080
DOI: 10.1039/C8DT02600A⁽¹³⁸⁾

DNA-encircled lipid bilayers

Iric, K.; Subramanian, M.; Oertel, J.; Agarwal, N. P.; Matthies, M.; et al. (10 authors)⁽¹³⁹⁾

Nanoscale 10(2018), 18463-18467
DOI: 10.1039/C8NR06505E⁽¹⁴⁰⁾

Layer-by-Layer assembly of heparin and peptide-polyethylene glycol conjugates to form hybrid nanothin films of biomatrices

Thomas, A. K.; Wieduwild, R.; Zimmermann, R.; Lin, W.; Friedrichs, J.; et al. (9 authors)⁽¹⁴¹⁾

ACS Applied Materials and Interfaces 10(2018)17, 14264-14270
DOI: 10.1021/acsami.8b02014⁽¹⁴²⁾

The oxidation of borohydrides by photoexcited [UO₂(CO₃)₃]⁴⁻

Takao, K.⁽¹⁴³⁾; Tsushima, S.⁽¹⁴⁴⁾

Dalton Transactions 47(2018), 5149-5152
DOI: 10.1039/c8dt00559a⁽¹⁴⁵⁾

2017

Molecular and Crystal Structures of Uranyl Nitrate Coordination Polymers with Double-headed 2-Pyrrolidone Derivatives

Kazama, H.; Tsushima, S.; Ikeda, Y.; Takao, K.

Inorganic Chemistry 56(2017)21, 13530-13534
DOI: 10.1021/acs.inorgchem.7b02250⁽¹⁴⁶⁾

Dipolar Relaxation Dynamics at the Active Site of an ATPase Regulated by Membrane Lateral Pressure

Fischermeier, E.; Pospíšil, P.; Sayed, A.; Hof, M.; Solioz, M.; et al. (6 authors)⁽¹⁴⁷⁾Fahmy, K.

Angewandte Chemie - International Edition 56(2017)5, 1269-1272
DOI: 10.1002/anie.201611582⁽¹⁴⁸⁾

2016

The molecular switching mechanism at the conserved D(E)RY motif in class-A GPCRs

Sandoval, A.; Eichler, S.; Madathil, S.; Reeves, P. J.; Fahmy, K.; et al. (6 authors)⁽¹⁴⁹⁾Boeckmann, R. A.

Biophysical Journal 111(2016)1, 79-89
DOI: 10.1016/j.bpj.2016.06.004⁽¹⁵⁰⁾

Rational Structure-Based Rescaffolding Approach to de Novo Design of Interleukin 10 (IL-10) Receptor-1 Mimetics

Ruiz-Gómez, G.; Hawkins, J. C.; Philipp, J.; Künze, G.; Wodtke, R.; et al. (8 authors)⁽¹⁵¹⁾Löser, R.; Fahmy, K.; Pisabarro, M. T.

PLOS ONE 11(2016)4, e0154046
DOI: 10.1371/journal.pone.0154046⁽¹⁵²⁾

Mechanism of attenuation of uranyl toxicity by glutathione in Lactococcus lactis

Obeid, M. H.; Oertel, J.; Solioz, M.; Fahmy, K.

Applied and Environmental Microbiology 82(2016)12, 3563-3571
DOI: 10.1128/AEM.00538-16⁽¹⁵³⁾

Anisotropic metal growth on phospholipid nanodiscs via lipid bilayer expansion

Oertel, J.; Keller, A.; Prinz, J.; Schreiber, B.; Hübner, R.; et al. (8 authors)⁽¹⁵⁴⁾Kerbusch, J.; Bald, I.; Fahmy, K.

Scientific Reports 6(2016), 26718
DOI: 10.1038/srep26718⁽¹⁵⁵⁾

Uranyl(VI) binding by bis(2-hydroxyaryl)diimine and bis(2-hydroxyaryl)diamine ligand derivatives. Synthetic, X-ray, DFT and solvent extraction studies

Jeazet, H. B. T.; Gloe, K.; Doert, T.; Mizera, J.; Kataeva, O. N.; et al. (10 authors)⁽¹⁵⁶⁾

Polyhedron 103(2016), 198-205
Online First (2015) DOI: 10.1016/j.poly.2015.01.005⁽¹⁵⁷⁾

2015

A single-strand annealing protein clamps DNA to detect and secure homology

Ander, M.; Subramaniam, S.; Fahmy, K.; Stewart, F.; Schäffer, E.

PLOS Biology 13(2015)8, A018
DOI: 10.1371/journal.pbio.1002213⁽¹⁵⁸⁾

2014

The Role of Phospholipid Headgroup Composition and Trehalose in the Desiccation Tolerance of Caenorhabditis elegans

Abusharkh, S. E.; Erkut, C.; Oertel, J.; Kurzchalia, T. V.; Fahmy, K.

Langmuir 30(2014), 12897-12906
DOI: 10.1021/la502654j⁽¹⁵⁹⁾

Filament formation by metabolic enzymes is a specific adaptation to an advanced state of cellular starvation

Petrovska, I.; Nüske, E.; Munder, M. C.; Kulasegaran, G.; Malinovska, L.; et al. (11 authors)⁽¹⁶⁰⁾

eLife 3(2014), 02409
DOI: 10.7554/eLife.02409⁽¹⁶¹⁾

Paramagnetic Decoration of DNA origami Nanostructures by Eu3+ Coordination

Opherden, L.; Oertel, J.; Barkleit, A.; Fahmy, K.; Keller, K.

Langmuir 30(2014)27, 8152-8159
DOI: 10.1021/la501112a⁽¹⁶²⁾

Experimental and Theoretical Approaches to Redox Innocence of Ligands in Uranyl Complexes: What is Formal Oxidation State of Uranium in Reductant of Uranyl(VI)?

Takao, K.; Tsushima, S.; Ogura, T.; Tsubomura, T.; Ikeda, Y.

Inorganic Chemistry 53(2014)11, 5772-5780
DOI: 10.1021/ic5006314⁽¹⁶³⁾

Uranium(VI) Chemistry in Strong Alkaline Solution: Speciation and Oxygen Exchange Mechanism

Moll, H.; Rossberg, A.; Steudtner, R.; Drobot, B.; Müller, K.; et al. (6 authors)⁽¹⁶⁴⁾Tsushima, S.

Inorganic Chemistry 53(2014)3, 1585-1593
DOI: 10.1021/ic402664n⁽¹⁶⁵⁾

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