trx-jvm - A library for reading TRX tractography files for the Java VM


trx-jvm - A library for reading TRX tractography files for the Java VM

Günther, U.; Notaro, C.; Bürger, J.

trx-jvm is a library implementing TRX (say, tee-ar-ex) file reading for JVM-based languages. TRX is a novel, open-source format for storing tractography data. trx-jvm was written with performance in mind, and uses imglib2 CellImgs for large array storage and access. It is able to parse and load a 4 GiB TRX file with 500000 streamlines in about 18 seconds on a standard notebook.

Keywords: Tractography; Visualization; Streamlines; Neuroscience

  • Software in external data repository
    Publication year 2022
    Programming language: Kotlin
    System requirements: Windows, Linux, macOS
    License: MIT License
    Hosted on Github: Link to location

Permalink: https://www.hzdr.de/publications/Publ-36115